FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005203631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005203631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55415994
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCA2440220.44034579619739384No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG741640.13383139892789797No Hit
CCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC558060.10070377876827401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)