FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005203839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005203839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7629130
Sequences flagged as poor quality0
Sequence length35-51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGAT163700.2145723037882432No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG82640.1083216565978034No Hit
CTCCAAACAAGCTCTCAAGGTCCATTTGTAGGAGAACGTAGGGTAGTCA78390.10275090344508482No Hit
CGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGC77160.10113866194441568No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)