FastQCFastQC Report
Thu 2 May 2024
EGAF00005204191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005204191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61640689
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length35-51
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1348580.2187808121353089No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA640740.10394757268206395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)