FastQCFastQC Report
Wed 1 May 2024
EGAF00005204195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005204195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46988859
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length35-51
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1624140.3456436343772467No Hit
CCTCAGCCAAGCACATACACCAAATGTCTGAACCTGCGGTTCCTCTCGTA480390.10223487231303062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)