FastQCFastQC Report
Wed 1 May 2024
EGAF00005204338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005204338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61009504
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGAAGTGCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAACATC670230.1098566544648519No Hit
GGGCATGTCGTCCACGTGCGCCACGGCGTTGGTCAGCGCGTCGGCCACCT656570.10761765904538415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)