FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005204798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005204798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14897263
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG273820.18380557556109467No Hit
AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG172280.11564540412557663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)