FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005207883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005207883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52448702
Sequences flagged as poor quality0
Sequence length25-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC413850.09.36788794-95
CGTCTGA290000.09.32162994-95
CACACGT502000.08.779366594-95
ATCGGAA1191400.08.58547194-95
GATCGGA1294650.08.56264494-95
AGATCGG1457500.08.4178994-95
ACGTCTG363600.08.35311294-95
TAGATCG415550.08.14785894-95
TCGGAAG1160700.08.07641194-95
CACGTCT426700.08.00975194-95
GCACACG609000.07.86982394-95
CGGAAGA1156850.07.695790394-95
AAGATCG485300.06.956565494-95
AGCACAC809200.06.848226594-95
AGAGCAC952850.06.73828994-95
CAGATCG503050.06.64765494-95
GAGCACA940850.06.273596394-95
AAGAGCA1189550.06.08687794-95
GAAGAGC1365550.06.0611394-95
GAGATCG561450.05.98680194-95
Produced by FastQC (version 0.11.5)