FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005207898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005207898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58511723
Sequences flagged as poor quality0
Sequence length25-101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG84300.08.34483994-95
GATCGGA152700.08.02280392-93
ATCGGAA168950.06.73247394-95
TAGATCG60950.06.263527490-91
AGATCGG193900.06.085722492-93
AGAGCGT159900.05.10770192-93
Produced by FastQC (version 0.11.5)