FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005207912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005207912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60368146
Sequences flagged as poor quality0
Sequence length25-101
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA154250.07.477415692-93
TAGATCG50250.06.991234390-91
ATCGGAA149250.06.12875786-87
AGATCGG202700.05.63594892-93
AGCGTCG125000.05.309606694-95
Produced by FastQC (version 0.11.5)