FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005207922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005207922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55409102
Sequences flagged as poor quality0
Sequence length25-101
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA133050.06.90315388-89
AGCGTCG87400.06.469955494-95
ATCGGAA136450.06.22770688-89
AGATCGG171000.05.546925586-87
TAGATCG49400.05.35192490-91
Produced by FastQC (version 0.11.5)