FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005207924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005207924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57929363
Sequences flagged as poor quality0
Sequence length25-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA120750.06.96472992-93
ATCGGAA135800.05.434703494-95
AGCGTCG71300.05.34249894-95
TAGATCG55600.05.239519690-91
AGATCGG153250.05.21957892-93
Produced by FastQC (version 0.11.5)