FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005208014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005208014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45248104
Sequences flagged as poor quality0
Sequence length25-101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC97100.05.980472694-95
TTAGATC79850.05.023952594-95
Produced by FastQC (version 0.11.5)