Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005211514 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23279849 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGGGGGG | 17285 | 0.0 | 12.39247 | 2 |
TGGGGGG | 38955 | 0.0 | 9.357197 | 2 |
ATGGGGG | 24075 | 0.0 | 9.017998 | 1 |
TAGGGGG | 9495 | 0.0 | 7.647338 | 1 |
AAGGGGG | 20935 | 0.0 | 6.832797 | 1 |
ATCGGAA | 19220 | 0.0 | 5.9220734 | 145 |
CGGAAGA | 20305 | 0.0 | 5.7484455 | 145 |
AGATCGG | 19825 | 0.0 | 5.595073 | 145 |
GATCGGA | 18620 | 0.0 | 5.4120607 | 140-144 |
TCGGAAG | 19625 | 0.0 | 5.2457333 | 145 |