FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005211515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005211515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23279849
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG113650.06.7618713145
GAGCGTC149600.06.106178145
AGCGTCG121900.05.887921145
ATCGGAA187800.05.8292384145
TAGATCG69600.05.729067145
CGGAAGA199000.05.5011606145
AGATCGG202300.05.447261145
GCGTCGT114250.05.3557057140-144
TCGGAAG191600.05.3352413145
GATCGGA186400.05.328502145
CGTGTAG118800.05.248225145
GTCGTGT119000.05.239405145
AGAGCGT159800.05.217369145
TCGTGTA114250.05.013042145
Produced by FastQC (version 0.11.5)