FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005211516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005211516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23416907
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG163750.09.5329712
TGGGGGG354750.08.0843642
ATGGGGG232900.07.57544041
TAGGGGG97900.05.85889241
GATCGGA180650.05.81913145
AAGGGGG203100.05.71980431
CGTCTGA119550.05.63977145
ATCGGAA185300.05.4774776145
TAGATCG69250.05.443918145
CGGAAGA193600.05.4298854145
AGATCGG192000.05.0522275140-144
TCTCGTA40303.5166522E-85.0371046145
ACACGTC129850.05.0249133145
Produced by FastQC (version 0.11.5)