FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22865122
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTCG90050.06.5212665145
CGTGTAG142450.06.3108797145
TCGTTGC48100.05.878279145
GTGTCGT83700.05.630132145
GAGCGTC183250.05.6179132145
GCGTCGT143250.05.435515140-144
GTCGTTG57800.05.3935075145
TCGTGTA140250.05.3656898140-144
AGCGTCG157000.05.3565974145
CGTCGTG143300.05.312192145
GTCGTGT149050.05.253182145
AGATCGG238750.05.0711184145
Produced by FastQC (version 0.11.5)