FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21491512
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG176150.017.6420142
ATGGGGG227950.012.7729681
TGGGGGG418000.012.4024932
TAGGGGG88500.010.5836021
AAGGGGG194400.010.4580041
CGCGTAT9600.0026903227.551905145
TTGGGGG289250.05.8488381
CGGAAGA236000.05.6524086145
TCTCGTA41557.6397555E-115.5835023145
AGATCGG240750.05.4505463145
CGTCTGA152000.05.4373713145
GATCGGA227350.05.4210286145
ATCGGAA228750.05.229385145
ACGTCTG172750.05.2039294145
ACGGGGG57750.05.1548841
ACACGTC168400.05.0369954145
Produced by FastQC (version 0.11.5)