FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21491512
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTAG141450.06.4067526145
TAGATCG80550.06.0303173145
AGCGTCG154200.05.78298145
GCGTCGT141700.05.679159145
CGGAAGA232700.05.514521145
GTCGTGT148800.05.5056224145
CGTCGTG140600.05.4863915140-144
AGATCGG242200.05.3880215145
GATCGGA225800.05.361959145
TCGTGTA142050.05.2568665145
ATCGGAA227400.05.1010604145
Produced by FastQC (version 0.11.5)