FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23760752
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG154700.05.811138145
GATCGGA236500.05.579176145
GCGTCGT156250.05.4286985145
AGCGTCG168150.05.3894315145
AGATCGG254900.05.2902102145
TAGATCG82650.05.263059145
CTTGTCG78850.05.2408657145
CGTGTAG158050.05.1375184145
TCGTGTA151800.05.062487145
Produced by FastQC (version 0.11.5)