FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35067830
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT238450.06.0200076145
GTCGTGT242600.05.887144145
CGTCGTG233100.05.816056145
AGCGTCG259850.05.71953145
AGAGCGT322650.05.5724893145
CGTGTAG230500.05.53568145
GAGCGTC304450.05.476979145
ATCGGAA383900.05.438806145
TCGTGTA231000.05.398159145
AGATCGG406100.05.1236343145
CGGAAGA392100.05.0292273145
Produced by FastQC (version 0.11.5)