FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32199078
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG225550.08.8525082
TGGGGGG500350.07.8940792
ATGGGGG326100.07.12482641
AGATCGG254600.05.837453145
GATCGGA239450.05.813187145
ATCGGAA242600.05.3791145
AAGGGGG279350.05.35418841
ACACGTC176750.05.1681967145
CACGTCT266600.05.112409145
TAGATCG91300.05.082029145
TAGGGGG130600.05.0035061
Produced by FastQC (version 0.11.5)