FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32912226
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT186450.06.6491227145
AGCGTCG194250.06.4567757145
GCGTCGT179050.05.8711658145
GAGCGTC232550.05.7674794145
CGTCGTG176250.05.7587676145
CGTGTAG179450.05.615675145
ATCGGAA296150.05.5815363145
TCGGAAG301300.05.413947145
GATCGGA296100.05.3866024145
AGATCGG320200.05.3660865145
AGAGCGT245800.05.338599145
TAGATCG110150.05.133821145
TCGTGTA178400.05.120429145
Produced by FastQC (version 0.11.5)