FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005212976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005212976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34645570
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT223900.05.7636266145
AGCGTCG229400.05.593837145
CGTGTAG218200.05.5819306145
CGTCGTG213200.05.5768194145
GCGTCGT215750.05.403374140-144
GATCGGA333200.05.2655087145
TAGATCG123300.05.2330737145
GAGCGTC271000.05.056179145
Produced by FastQC (version 0.11.5)