FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005213047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005213047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49236174
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1432440.29093243516443823No Hit
TTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG738280.14994666319929734No Hit
AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG602910.12245265036231287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)