FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005213072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005213072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19287256
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA171150.06.0151014145
GTCGTGT181800.05.9020014145
CGTGTAG172800.05.8737545145
CGTCGTG181650.05.5077624145
AGAGCGT235200.05.4867377145
GCGTCGT184900.05.434478140-144
AGACGAT85200.05.360835145
AGCGTCG199350.05.346045145
TAGATCG98600.05.2940383145
AGATCGG302600.05.175071145
GAGCGTC223400.05.127497145
TCGGAAG283700.05.0342917145
GATCGGA283500.05.0122705145
Produced by FastQC (version 0.11.5)