FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005213074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005213074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19409833
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG205200.06.0415606145
CGTGTAG176950.05.776954145
CGTCGTG186000.05.7687154145
TCGGAAG296750.05.741264145
GCGTCGT189300.05.6681514145
GTCGTGT186400.05.3673944145
CGGAAGA291750.05.342665145
GATCGGA295400.05.301193145
AGATCGG315900.05.1866765145
TCGTGTA175250.05.1710935145
AAGAGCG273650.05.0072203145
Produced by FastQC (version 0.11.5)