FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005275818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005275818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16618509
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCAT268300.09.9093031
CCTGCAT236350.08.59668351
CCTTGAT296600.08.5022591
CCTTCAC228100.08.2126911
TTGGAGT105000.08.1596388
CCTACAC78800.08.1376921
CATGCAT70650.08.056611
TAAGGGG33800.07.8871932
CATTGAT234800.07.6714831
CCTACAT90250.07.66410541
CCTTGAC201750.07.6425391
CGTTGGA111250.07.50724126
CTTGCGT129000.07.4843232
GTTACAT91550.07.3978741
TGGAGTG103250.07.39144049
GTATAGG51750.07.37909271
CCTTTAT173650.07.30256271
CATGGAT178900.07.28963331
CCTGTAT133400.07.1294421
CATTGAC181100.07.1215091
Produced by FastQC (version 0.11.5)