FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005275819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005275819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16618509
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCAT257200.09.2674871
CCTGCAT230500.08.6539381
CCTACAT86800.08.1303891
CATTGAT230200.07.8831571
CCTTCAC222950.07.751911
CATTACC146000.07.74375771
GTATACG59150.07.66991851
CCTTTAT172750.07.628481
CCTTGAT287600.07.48664571
CCTGCAC224650.07.4047521
GTATAAG103150.07.12091641
CCTACAC82050.07.1090471
CATTGAC185750.07.05582051
CATGCAT70550.07.0429891
CATGAGT81850.07.03843741
CATGGAT172050.07.03168731
CTTGCAT134200.06.92216871
GTATATG126800.06.81501671
CCTTGAC198500.06.71144721
GTATATT169400.06.67407661
Produced by FastQC (version 0.11.5)