FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005275820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005275820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14268217
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT82700.030.6533364
AGTGGTA85150.029.677835
AGCAGTG111250.022.9830932
GCAGTGG118000.021.665953
GTGGTAT125800.020.374136
GTATCAA153500.016.9321279
AAGCAGT172400.015.5225181
GGTATCA183000.014.2419748
TGGTATC185100.014.1969857
CTTGGGG80950.06.172266535-39
CAACGCA108350.05.661326410-14
TCTTGGG96500.05.446250435-39
TTGGGGG55800.05.264147340-44
Produced by FastQC (version 0.11.5)