FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005275828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005275828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13359235
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGG4401.0446747E-616.3590474
TCTAGGC6657.3846E-510.8238295
TCTCTAG7452.3279602E-49.6617193
CTAGGCA8206.083026E-48.7778626
GTCTTCT121950.06.49252229
TGGAGTG66000.06.21632249
TTGGAGT68850.05.95900158
CGTCTTC157150.05.4504858
CTAGGTC4855.8209647E-55.3451405140-144
Produced by FastQC (version 0.11.5)