EGAF00005278318 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005278318
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2283437
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35616	1.5597540024095258	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15496	0.6786261236898588	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13554	0.5935788900679108	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9938	0.4352211162383723	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6266	0.2744108990088187	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4326	0.189451252651157	No Hit
GTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4144	0.18148081160110832	No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG	2519	0.11031615936853087	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2509	0.10987822304709963	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	2444	0.10703163695779652	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	745	55.522858	2
GTATCAA	4930	53.131744	1
GGTATCA	1935	51.128677	1
TCACGCA	845	48.95103	4
TATAACG	540	48.74608	2
ACAACGC	715	46.676437	3
GTATCAC	985	45.9157	1
ATAACGC	685	45.28963	3
ATCACGC	925	44.71841	3
GTACGGG	6910	42.4071	1
GAGTACG	3910	41.689392	1
AGTACGG	4190	40.947205	2
ATAATAC	2105	40.194427	3
TACGGGA	3710	39.783333	2
GTATAAC	845	39.027214	1
ACGCAGA	9440	38.234776	6
AACGCAG	8430	37.908897	5
CACGCAG	1125	37.178967	5
CAACGCA	7850	37.004517	4
GTACGGA	470	36.99757	6