EGAF00005278390 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005278390
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4530031
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39628	0.8747843005930865	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19580	0.43222662273172086	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15586	0.3440594556637692	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10605	0.23410435822624615	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7392	0.16317769127849235	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	6066	0.1339063684111654	No Hit
GTATGAAACTGTGGTTTGCTCCACAGATTTCAGAGCATTGACCGTAGTAT	5212	0.11505440028997593	No Hit
GGATGTAGCAATACATTCAGTAGCGAATGGGTGAGTAACACGTACCTAAC	5000	0.11037452061586334	No Hit
GTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4911	0.10840985414890096	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4676	0.10322225167995538	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	1330	57.260345	2
TCACGCA	1440	52.558674	4
ACAACGC	870	52.41349	3
TATAACG	910	48.043224	2
ATAATAC	3645	46.300694	3
GTACGGG	15425	44.947407	1
GTATCAA	8275	44.57088	1
ATAACGC	1320	42.736397	3
TACGGGG	7015	42.218567	2
GTATCAC	1975	41.791058	1
GAGTACG	9250	41.708447	1
ATCACGC	1820	41.585804	3
GTATAAC	1605	41.14011	1
AGTACGG	9305	40.72014	2
CACGCAG	1910	40.34771	5
ACGGGGC	2320	39.310116	3
GGTATCA	4010	37.63726	1
TACGGGA	7540	37.53321	2
ACGCAGA	13695	37.36786	6
GTACTTT	24255	37.140224	1