EGAF00005278508 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005278508
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3811791
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25297	0.6636512862326398	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13071	0.34290967159532093	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9337	0.2449504707891907	No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG	7571	0.1986205434663128	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	6207	0.1628368396903188	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6014	0.15777360301233725	No Hit
CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCT	5177	0.13581542114979547	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4882	0.12807627700469412	No Hit
GTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTACTGCTCGGAG	4380	0.11490661476455555	No Hit
GTATAGTACGGATGCTACTTGTCCAATGATGGTAAAGGGGTAGCTTACTG	4218	0.11065664408148296	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	865	57.608223	2
TATAACG	750	49.51771	2
ATAATAC	3970	47.60256	3
GTACGGG	12270	47.18324	1
GAGTACG	6665	45.236446	1
GGTATCA	2690	44.727608	1
GTATCAA	5700	44.699913	1
TCACGCA	1150	42.92205	4
TACTAAG	2355	42.903637	7
GTATAAC	1375	42.550705	1
CTAAGTT	2240	41.74953	9
TACGGGA	6275	41.72883	2
AGTACGG	7135	41.44302	2
GTATAAT	4100	40.278374	1
TAATACT	4170	40.24586	4
ATAACGC	1195	39.73271	3
GTACTTT	17495	38.37768	1
GTATCAC	1480	38.25668	1
ACGGGGC	1900	38.103233	3
CTATACT	3440	37.580566	4