FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005279126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22552931
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA365400.010.41913794-95
AGCGTCG114250.010.39261194-95
ATCGGAA329550.010.281795594-95
AGATCGG422500.010.22749994-95
GCGTCGT97700.010.18033494-95
TAGATCG135850.09.68602994-95
GAGCGTC152850.09.60505994-95
TCGGAAG316600.09.44723494-95
CGTCGTG90950.09.44462794-95
AGAGCGT173950.09.34279194-95
AAGAGCG206600.08.64947994-95
TCGTGTA77550.08.37647294-95
CGGAAGA314100.08.36337494-95
CAGATCG155550.08.12278394-95
AAGATCG140750.08.08090194-95
CGCCGTA15900.08.06559646-47
GTCGTGT87650.07.899895794-95
CGTGTAG81600.07.581645594-95
GAGATCG178850.07.38387594-95
GCCGTAT20050.06.39615846-47
Produced by FastQC (version 0.11.5)