FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1009170
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCC20270.20085813093928673No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17720.17558984115659404No Hit
GACCTAGGACGGTGACCATGGTCCCAGGTCCGAAGACTCGAAAGCCATCG16580.16429342925374318No Hit
CACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACA16460.1631043332639694No Hit
ACCTAGGACGGTGACCATGGTCCCAGGTCCGAAGACTCGAAAGCCATCGC16200.16052795861945954No Hit
GTTTGGAGGGTTTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCCATCT16130.15983431929209152No Hit
CCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGT16030.15884340596728005No Hit
GTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTC15280.15141155603119397No Hit
GTAATAGTCAGCCTCATCCTCAGACTGGAGGCTGGAGATTGTGAGGTACC15000.1486369987217218No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA14660.14526789341736276No Hit
CAGTAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGG13570.13446693817691766No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA12660.1254496269211332No Hit
GTACATGGGAGAGCTCTGGGGAGTCTGCACCATGGCTTGGACCCCACTCC11980.11871141631241515No Hit
GTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGT11210.11108138371136676No Hit
CTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGG10820.10721682174460201No Hit
GACTATTACTGTCAGACCTGGGGCGATGGCTTTCGAGTCTTCGGACCTGG10540.10444226443512986No Hit
CTCCCAGATTGTTCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAG10530.10434317310264872No Hit
ACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGC10520.10424408177016756No Hit
GGGTTAGAGTTGGGAACCTATGAACATTCTGTAGGGGCCACTGTCTTCTC10510.10414499043768642No Hit
GTGCAGGGAGAAGGGCTGGATGACTTGGGATGGGGAGAGAGACCCCTCCC10390.10295589444791264No Hit
TCCTCAGACTGGAGGCTGGAGATTGTGAGGTACCGCTCAGCCCCAGAGCT10120.10028042847092164No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)