EGAF00005279708 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005279708
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	492474
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATAAACGGCCGTGTCCTCGGTTCTCAGGCTGTTCATTTGCAGAAACA	1291	0.2621458188655645	No Hit
GTTTATTACTGTGCGGCCAACCACCTGCCATGGGCTTTTGATTTCTGGGG	726	0.147418950035941	No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA	714	0.14498227317584278	No Hit
GCATAATATGTGTTAGTGCTAGTACTACCGCTATAAGTAATTGAGACCCA	674	0.13686001697551545	No Hit
ATATTATGCAGACTCCGTGGAGGGCCGGTTTACCATCTCCAGAGATAATT	583	0.1183818841197708	No Hit
GTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCA	556	0.11289936118454985	No Hit
GTGCCTAGCCGGCAAGTCCGTGACATGCCACGTGAAGCACTACACGAATC	550	0.11168102275450076	No Hit
TCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAA	527	0.10701072543931253	No Hit
CGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGG	514	0.10437099217420615	No Hit
GTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGCAGGTCCTCGAGGGCC	510	0.10355876655417343	No Hit
GTGCTAGAGAATACGTACCATGAAATACATATATTTCATAAGGTTCAGTT	501	0.10173125890909979	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	625	0.0	63.390194	4
ATCAACG	645	0.0	61.424603	3
CAACGCA	680	0.0	58.257122	5
GTATCAA	775	0.0	54.850174	1
TATCAAC	785	0.0	53.22821	2
ACGCAGA	810	0.0	49.776196	7
CGCAGAG	810	0.0	49.776196	8
AACGCAG	800	0.0	49.498432	6
GAATACG	210	0.0	44.570015	9
GCAGAGT	1000	0.0	38.878765	9
TCTACAC	495	0.0	37.8362	3
TCTATAC	225	2.1827873E-11	35.21677	3
TACATGG	1355	0.0	34.027042	2
GTACATG	1345	0.0	33.747837	1
CTAGAGA	385	0.0	31.807356	4
ACCTAGG	140	2.8633644E-5	30.878124	1
AGAATAC	335	0.0	30.088598	8
CTCTACA	650	0.0	28.816652	2
GCTAGAG	350	0.0	28.813723	3
AGGACCG	100	0.0062687816	28.810795	5