FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences849831
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT21660.2548742044006397No Hit
TGATTACACTTACCCGTGGGCGTTCGGCCAAGGGACCAAGGTGGACATCA21620.25440352258272525No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC17910.21074778397116603No Hit
GTAGTACTATAGCTTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCC16770.19733335216060602No Hit
GTGTAATCATGTTGACAGTAATAAGTTGCAAAATCTTCAGGTTGCAGGCT16440.19345022716281238No Hit
GATTTACACTGGTATCAACTGAAGCCCGGGAGAGCCCCTAATCTCCTGAT13960.16426795445212047No Hit
GTATTATTGTGCAAAGGTACTTCTGTTCCACGGTGCTTTTGATACCTGGG13460.15838443172819067No Hit
GGTATCAACTGAAGCCCGGGAGAGCCCCTAATCTCCTGATCTATCGTGCA12470.14673505673480963No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG12030.1415575567377514No Hit
TAGTACTACTGTCCCAACTAATTCCTGACACCCACTCCAGGCCCTTCCCT11950.1406161931019226No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC11670.1373214203765219No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT11660.13720374992204332No Hit
CAATAATACAGGCCCGTGTCCTCAGCGCGCAGGCTGTTCATGTGCAAAAA11190.1316732385615493No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT10460.12308329538461175No Hit
ACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTC9720.11437568175319562No Hit
GCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGG9650.11355198857184545No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC9580.1127282953904953No Hit
GTTGGGGACAGAGTCACCATCTCTTGCCGGACAAGTCAGGACATTAGAGA9540.11225761357258089No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT9380.11037488630092336No Hit
ATACAGGCCCGTGTCCTCAGCGCGCAGGCTGTTCATGTGCAAAAAGAGGG9320.1096688635740518No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA9220.10849215902926583No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG9080.10684477266656546No Hit
GTGTAAATCATCTCTAATGTCCTGACTTGTCCGGCAAGAGATGGTGACTC9070.10672710221208688No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGG9060.10660943175760827No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTAT8730.10272630675981459No Hit
GAGTTCACTCTCACCATCAGCAGCCTGCAACCTGAAGATTTTGCAACTTA8660.10190261357846443No Hit
GTACTATAGCTTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGA8650.10178494312398582No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)