EGAF00005279747 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005279747
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2121310
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAATAACTGGCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGA	4500	0.21213306871697207	No Hit
ACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGA	4239	0.19982935073138766	No Hit
GTAATACACAGCCGTGTCCTCGTCTCTCAGGCTATTCATTTGCAAATACA	3670	0.173006302709175	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3289	0.15504570289113803	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	3230	0.15226440265684885	No Hit
GTATATGGTACTACTAGTACGACTAATGTATGAAACCCACTCCAGCCCCT	3183	0.15004879060580492	No Hit
GTGTATTACTGTGCGAGAGATGACTACACTGACTACTGGGAGGACCGTTA	2825	0.13317242647232136	No Hit
TTATTATACTGCTGACAGTAATAAACTGCAAAATCTTCAGACTGCAGCCT	2709	0.12770410736761717	No Hit
GTTATTATACTGCTGACAGTAATAAACTGCAAAATCTTCAGACTGCAGCC	2207	0.10403948503519053	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2157	0.10168245093833528	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	5070	67.026184	1
GGTATCA	2635	61.203724	1
TCAACGC	5425	61.05047	4
ATCAACG	5550	59.67546	3
CAACGCA	6050	54.743603	5
AACGCAG	6220	53.2474	6
TATCAAC	6415	51.965523	2
CGCAGAG	6870	48.10463	8
GCAGAGT	7605	43.263058	9
ACGCAGA	10080	32.92845	7
GTACATG	6170	28.238436	1
TACATGG	6225	27.758936	2
ACATGGG	6240	27.115288	3
ACTACGC	3045	24.354593	8
TATACTA	3680	23.478178	5
ATATACT	3685	22.860163	4
TACTACG	3240	22.666586	7
CTACGCA	3270	22.23688	9
CAGAGTA	7870	22.138126	9
ATACTAC	3690	21.85358	6