FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1124893
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATATACACTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGG58890.5235164588987574No Hit
GTAATACACGGCCGTGTCCTCAGATCTCAGTGTCCTCAGTTCCATGTAGA27640.24571225885484219No Hit
GTCTACATGGAACTGAGGACACTGAGATCTGAGGACACGGCCGTGTATTA23740.2110422946893616No Hit
GTGTATATAGTAAGTGGTGAAGGTGTATCCAGATGCCTTGCAGGAAAGCT20230.179839326940429No Hit
ACTATATACACTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATG17010.15121438216790398No Hit
GTGTATTACTGTGCGAGAGGGTCGACCGTGAACTTCTATGACAGTAGTGG15110.13432388680523394No Hit
GTCTGGGGCTGAGGCGAAGAAGCCTGGGGCCTCAATGAAGCTTTCCTGCA14790.13147917179678423No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA14280.12694540725206754No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT14110.12543415240382863No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC13740.12214495067530866No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT13150.11690000737847954No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC13100.1164555206584093No Hit
GTATATGAGTTGCAATAATAATCAGCCTCGTCTTCAGCCTGGAGCCCAGA12840.11414418971404391No Hit
GCCTTGGGCTGACCGAGGACGGTCACCTTGGTCCCTCCGCCGAACACCCA12030.10694350484890564No Hit
CATGTAGACTGTGCTCGTGGACGTGTCCCTGGTCATGGTGACTCTGCCCT11860.10543225000066672No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA11620.10329871374432946No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC11600.10312091905630134No Hit
CTCATATACAGACAGCAGCACTTGGGTGTTCGGCGGAGGGACCAAGGTGA11440.1016985615520765No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG11250.1000095120158095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)