EGAF00005279828 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005279828
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	778167
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	1222	0.1570357005629897	No Hit
GTATATGGTGCCACCGTTACCACTGATAGTCGAGACCCACTCCAGCCCCT	1174	0.15086735880601465	No Hit
TTTAAAAGGTGTCCAGTGTGAGGTGCATCTGTTGGAGTCTGGGGGAGGCT	1161	0.14919676624683392	No Hit
GTAATACACGGCGGAATCCTCGGCTCTCAGGCTGTTCATTTGCAGATGCA	1097	0.14097231057086718	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1092	0.14032977497118226	No Hit
CTTTTATACAATTCCAACAAAAAGAACTACTTAGCTTGGTACCAGCAGAA	937	0.12041117138095037	No Hit
CAGTAATACACGGCGGAATCCTCGGCTCTCAGGCTGTTCATTTGCAGATG	863	0.11090164450561384	No Hit
CCCTAAGACATTGCTTTCAAAATAATAAGGAAGGGACGCCCGCACACAGT	821	0.10550434546826068	No Hit
TCTGGGCACTGTGTGGCCGGCAGGGTCAGCTGGCTGCTCGTGGTGTACAG	803	0.10319121730939503	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	970	0.0	54.191563	1
TCAACGC	970	0.0	54.10782	4
ATCAACG	990	0.0	52.2885	3
CAACGCA	1130	0.0	45.81028	5
AACGCAG	1165	0.0	45.685936	6
TATCAAC	1325	0.0	39.611008	2
CGCAGAG	1385	0.0	38.428963	8
TGTACCG	100	1.461245E-4	35.94835	5
GGTATCA	555	0.0	33.73346	1
GTACATG	2070	0.0	29.916351	1
ACATGGG	2000	0.0	29.477642	3
TACATGG	2125	0.0	29.097013	2
ACCGACC	325	1.8189894E-12	28.76979	9
GCAGAGT	1825	0.0	28.76979	9
CCTATAC	260	4.0636223E-9	27.65257	3
CACCGAC	375	0.0	26.851807	8
GCACCGA	410	1.8189894E-12	24.559578	7
ACGCAGA	2225	0.0	24.244207	7
AGAGTAC	1490	0.0	24.126408	5
TAGGACC	345	3.263267E-9	22.923582	4