FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences704511
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATTACTGTGCGAGCCCACCACTAACGATTACTTCTACGGTTAATGC22150.31440247206927924No Hit
GTAATACACAGCCGTGTCCTCAACTCCCAGGCTGTTCATTTGCAGATACA20150.28601398700659036No Hit
ACTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGACTGGGTGGC13780.1955966620819263No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT13180.18708011656311968No Hit
TTTAAGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTCTGGGGGAGGCG13060.18537680745935833No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT12290.17444724071022313No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC11210.15911745877637112No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA10850.1540075314650871No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC10620.15074285568287793No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA10420.14790400717660904No Hit
GTATTACTGTGCGAGCCCACCACTAACGATTACTTCTACGGTTAATGCTG9940.1410907707615637No Hit
CTACTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGACTGGGTG8430.1196574645392336No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8410.1193735796886067No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT8390.11908969483797982No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG8320.1180960978607857No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTTGTGCACCAGG8280.11752832815953194No Hit
GGGCTGGACTGGGTGGCAGTTATATCATATGATGGAAGAAACAAATACTA8130.11539919177983027No Hit
GTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGT7830.11114091902042693No Hit
CTCCTGTGAAGCCTCTAGATTCACCTTCAGTGACTCTACTATGCACTGGG7750.1100053796179194No Hit
GCCTGGGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGCCCACCACTA7410.10517933715726228No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCGTTCAGCCAGTCCTGGTGCA7260.10305020077756061No Hit
GCCCAGGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGT7120.10106300682317239No Hit
TCCTACGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC7110.10092106439785895No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)