FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences922758
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC28610.31004878852310136No Hit
GTGCAGGGTCCTGGGCCCAGTCTGCGCTGACTCAGCCCCCCTCAGCGTCT26520.28739929645692586No Hit
GTAATAATCAGCCTCATCCTCAGACTGGAGTCCACTGATGGCCAGGGAGG26390.2859904763762547No Hit
GTCCTGGGCCCAGTCTGCGCTGACTCAGCCCCCCTCAGCGTCTGCGACCC26000.28176401613424107No Hit
GATTATTACTGTTCAGCATGGGATGACAGCCTGAATGGTCCGGTGTTCGG22780.24686862644376964No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGGACCATTCAGG22240.24101660457021234No Hit
CCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGCGCTGACTCAGCCCC20980.22736188686524528No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGG17950.19452554190806257No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA17930.1943088003571901No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT16900.18314661048725667No Hit
GTTTAGAACCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGC16350.17718621783826313No Hit
ATATATTACTGTGCGCGAGGAGGTGATGACTACAGCCTTGACTACTGGGG16050.17393509457517572No Hit
GTACATGGGAGCTTCAGCTGTGGGTAGAGAAGACAGGACGCAGGACAATC15860.17187604984188704No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC15540.16840818502792715No Hit
CTTATACTGTGAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTC15340.16624076951920222No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA15250.165265432540276No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT15200.16472357866309476No Hit
GAACTTATACTGTGAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAA13870.15031026553007398No Hit
GTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCA13740.1489014454494028No Hit
GTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCT13370.14489172675826165No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA13370.14489172675826165No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG13120.1421824573723555No Hit
GTAATATATGGCCGTGTCGTCAGATCTCAGGCTCCCCAGCTCCATGTAGG12970.1405568957408118No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCA12930.1401234126390668No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC12550.13600532317248942No Hit
CTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGG12520.13568021084618068No Hit
ACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGGACCATTCAGGC11980.12982818897262338No Hit
TATTTATTGAGGGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGG11830.12820262734107968No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT11800.12787751501477093No Hit
GGGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAG11700.12679380726040848No Hit
CCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCT11620.1259268410569185No Hit
ATATTACTGTGCGCGAGGAGGTGATGACTACAGCCTTGACTACTGGGGCC11580.12549335795517352No Hit
CTTATGAGACACACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGA11170.1210501561622874No Hit
GTATCAACGCAGAGTACATGGGAGCTTCAGCTGTGGGTAGAGAAGACAGG11010.11931622375530747No Hit
GTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTC10940.11855762832725374No Hit
TCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGCGCTG10700.11595672971678381No Hit
GGGTAGAGAAGACAGGACGCAGGACAATCTCCAGCATGGCCAGCTTCCCT10640.11530650506416634No Hit
CACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGAGGGCGGGAACA10490.11368094343262264No Hit
GTCATGATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAG10420.1129223480045689No Hit
GGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCGTCTATGGTCAT10340.11205538180107893No Hit
TCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGCGCTGACTCAGCCC9880.1070703261310116No Hit
GCTCAGGCGTCAGGCTCAGGTAGCTGCTGGCCGCGTACTTGTTGTTGCTT9850.10674521380470287No Hit
AACTTATACTGTGAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAAC9510.10306060743987047No Hit
GGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGA9510.10306060743987047No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)