FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences984029
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTACATGGAGCTGACCAGCCTGACATCTGAGGACACGGCCCTGTATTA26240.2666588078196882No Hit
GTATTACTGTGCGAGCGAGCAGTGGCTGCCCACCGGACGCCTACGTCCCC17970.18261656922712644No Hit
GTAATACAGGGCCGTGTCCTCAGATGTCAGGCTGGTCAGCTCCATGTAGA17960.18251494620585368No Hit
GTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCTTGCA17390.17672243399330712No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT16840.171133167823306No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC15960.16219034195130427No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT15740.15995463548330385No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA14510.14745500386675597No Hit
CTGTATTACTGTGCGAGCGAGCAGTGGCTGCCCACCGGACGCCTACGTCC14110.14339008301584608No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC14030.1425770988456641No Hit
GCCCTGTATTACTGTGCGAGCGAGCAGTGGCTGCCCACCGGACGCCTACG14000.14227222978184587No Hit
TTCCAGGACAGAGTCACAATTACCGCGGACGAATCGACGAGCACAGTCTA13540.1375975708032995No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA13220.13434563412257158No Hit
CTCTTGAACCACTCAGGCTGCTGTCGTAAGACTGGCAGTAATAATCACCT13140.13353264995238961No Hit
ATACAGGGCCGTGTCCTCAGATGTCAGGCTGGTCAGCTCCATGTAGACTG13090.1330245348460259No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT12810.13017909025038896No Hit
CAGTAATACAGGGCCGTGTCCTCAGATGTCAGGCTGGTCAGCTCCATGTA12160.12357359386766041No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG11980.12174437948475096No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTTGTGCACCAGG11320.11503726008074966No Hit
CCATGTAGACTGTGCTCGTCGATTCGTCCGCGGTAATTGTGACTCTGTCC10450.10619605723002067No Hit
GTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGT10280.10446846586838396No Hit
ACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCAACAGG10120.10284249752802001No Hit
CATGTAGACTGTGCTCGTCGATTCGTCCGCGGTAATTGTGACTCTGTCCT10050.10213113637911077No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)