FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1261652
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTACACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATGCCTGG30720.2434902809966615No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT24940.19767733099143028No Hit
TCTATGATGTGTCCAACAGGGCCACTGGCGTCCCAGCCAGGTTCAGTGGC24070.19078161014289202No Hit
ATACAGGGCTGTGTCCTCGACTTTCAGGCTGTTCATTTGCAGGTACAGCG23370.18523332900038997No Hit
GTATTATTGTACCACAGACGCAGCATTTCGTCCGTATTGGTTCCAATTTT22150.17556346758060068No Hit
GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTGTCCT22030.17461233367045748No Hit
CAATAATACAGGGCTGTGTCCTCGACTTTCAGGCTGTTCATTTGCAGGTA21810.17286858816852824No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC18870.14956580737001962No Hit
GTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTC16370.12975051757536943No Hit
GTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAG15260.12095252890654475No Hit
CTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATGCCTGGATGACCTGGG14600.11572129240075711No Hit
GTCATGGAACCATGGGGAGACCTTCACCTGCACTGCTGCCCACCCCGAGT13720.10874631039304024No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT13570.10755739300536123No Hit
GCCCTGTATTATTGTACCACAGACGCAGCATTTCGTCCGTATTGGTTCCA13570.10755739300536123No Hit
TCTGGGCACTGTGTGGCCGGCAGGGTCAGCTGGCTGCTCGTGGTGTACAG13350.10581364750343202No Hit
GTCCTGCAGGGCCAGTCAGAGTGTGGGCAACGCCTTAGGCTGGTACCAAC13210.1047039912749316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)