FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2067500
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT53550.2590084643288996No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27730.13412333736396614No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24990.12087061668681982No Hit
GATATACACTGGTACCAGCAGCTTCCCGGAACAGCCCCCAAACTCCTCAT24080.11646916565900846No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC23450.11342200725513905No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC22200.10737605804111246No Hit
CCTTATGATATACACTGGTACCAGCAGCTTCCCGGAACAGCCCCCAAACT20770.10045949214026603No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA20730.10026602176541717No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)