FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005279961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005279961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences925344
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATG22890.24736746550472039No Hit
CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGG21010.22705069682193865No Hit
GTGTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTA16960.18328318981913752No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC14930.16134540235847425No Hit
GTAATACACGGCCGTGTCCTCAGATCTCAGGCTGCTCAGCTCCATGTACA14160.1530241726320158No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12460.13465262648269186No Hit
GACCTAGGACGGTCACCTTGGTCCCTCCGCCGAACACCCAAGTGCTGCTG10420.11260677110350313No Hit
TATACAGACAGCAGCACTTGGGTGTTCGGCGGAGGGACCAAGGTGACCGT10010.10817598644396031No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT9630.10406940553999376No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)