EGAF00005279990 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005279990
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	922769
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1476	0.1599533577742642	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT	1275	0.13817109157329732	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	1224	0.13264424791036541	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1214	0.13156055307449643	No Hit
GTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCA	1214	0.13156055307449643	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	1146	0.12419142819058723	No Hit
ATAATAGACGGCCGTGTCGTCAGATCTCAGGCTGCTCAGTTCCATGTAGG	1119	0.12126545213374096	No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC	1101	0.11931480142917675	No Hit
GCCTACATGGAACTGAGCAGCCTGAGATCTGACGACACGGCCGTCTATTA	1051	0.11389632724983176	No Hit
GTCTATTATTGTGCGGGCGATCCCGGATATTGTCGTGGCAATAATTGTTA	1045	0.11324611034831036	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	967	0.10479329062853217	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCAACG	855	0.0	58.95087	3
CAACGCA	920	0.0	54.78587	5
TCAACGC	910	0.0	54.596653	4
TATCAAC	1065	0.0	50.031147	2
AACGCAG	1060	0.0	48.216217	6
CGCAGAG	1330	0.0	38.9692	8
GTACATG	2100	0.0	35.316383	1
CAGCGCT	575	0.0	35.053455	9
ACGCAGA	1610	0.0	32.19195	7
GGCAGCG	740	0.0	29.183018	7
ACATGGG	2520	0.0	29.14459	3
ACCGACC	150	4.6175315E-5	28.79391	8
GCAGCGC	675	0.0	28.79391	8
GCAGAGT	1820	0.0	28.477493	9
GTATCAA	1905	0.0	27.214216	1
GAATACG	275	7.2977855E-9	26.176281	9
CATGGGG	1470	0.0	25.96073	4
GGTATCA	515	0.0	23.768404	1
TACACCG	155	0.0018820146	23.227188	5
GTATGTA	1090	0.0	23.120642	1