FastQCFastQC Report
Wed 11 May 2022
EGAF00005280015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30090404
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATAC904100.3004612367451098No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATAGTAGTTCGCTTTG596930.19837885858893756No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA568550.18894728033561797No Hit
ACGCCGAGTTCCTTTTACTTTTTTTAACCTTTCCTTATGAGCATGCCTGT547630.1819948977753838No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGT531130.17651142204670964No Hit
ACGGGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGC475490.15802047722589566No Hit
GGTGAAGTCTTAGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTC443440.14736924103777405No Hit
AGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTG412500.13708689321685413No Hit
CGTTGGGTTGACAGTGAGGGTAATAATGACTTGTTGGTTGATTGTAGATA408670.13581406218407702No Hit
GCACTCTACTCTCAGTTTACTGCTAAATCCACCTTCGACCCTTAAGTTTC393530.13078255778819053No Hit
ATGAGGGTAATAATGACTTGTTGGTTGATTGTAGATATTGGGCTGTTAAT355650.11819382684260404No Hit
CATGCCTGTGTTGGGTTGACAGTGAGGGTAATAATGACTTGTTGGTTGAT345180.11471431224386351No Hit
TGCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTG344410.11445841670985873No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGGTGACGGGCGGTGTGTACGCGCT342600.1138568960390163No Hit
AGTTGGTTGATTGTAGATATTGGGCTGTTAATTGTCAGTTCAGTGTTTTA342120.11369737674509121No Hit
GCCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATA328380.1091311369564862No Hit
CTGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGCGG324500.1078416893305919No Hit
AGTGAGGGTAATAATGACTTGTTGGTTGATTGTAGATATTGGGCTGTTAA323600.1075425906544824No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACT312630.10389691012456993No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)