FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences840012
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT13660.162616724522983No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT13290.15821202554249225No Hit
CTTCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTG12380.14737884696885284No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA11710.1394027704366128No Hit
GTTTTATACAGCTCCGACAATAAGAACTACTTAGCTTGGTACCAGCAGAA11480.13666471431360505No Hit
CTGTAGGACAGCTGGGAAGGTGTGCACGCCGCTGGTCAGAGCGCCTGAGT10220.12166492859625815No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC9880.11761736737094233No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC9530.11345076022723484No Hit
ATAATACACGGCCGTGTCCTCGGTTTTCAGGCTGCTCATTTGCAGATATA9070.10797464798121932No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC9050.10773655614443603No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)