EGAF00005280057 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280057
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	625187
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGG	1417	0.2266521856660487	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	1230	0.19674113505239232	No Hit
TGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGG	1191	0.1905030015019506	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1075	0.1719485529929445	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1053	0.16842960586192612	No Hit
GTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGG	864	0.13819865096363168	No Hit
GTCTTATATGATGGGAGGACCACCTACAACCCGTCCCTCAATAGTCGAGT	829	0.13260032598246604	No Hit
ACCTATGACAGCGTGACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGT	796	0.12732190528593845	No Hit
CTACTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGACATCAAGCGA	790	0.12636219243202435	No Hit
TCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTGATGTCAGAGTTGTTCT	775	0.12396291029723908	No Hit
GGTGTAGGTCTCCCCCGTGTTCCATTCCTCTTCGGACACGGTCAGGATGC	758	0.12124372387781576	No Hit
CCTATGACAGCGTGACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGTG	748	0.11964420245462556	No Hit
ATATATGGCCGTGTCCGCGGCGGTCACAGAATTCAGATTCAGGGAGAATT	738	0.1180446810314354	No Hit
ATAATATATGGCCGTGTCCGCGGCGGTCACAGAATTCAGATTCAGGGAGA	732	0.1170849681775213	No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT	705	0.11276626033490779	No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG	705	0.11276626033490779	No Hit
GTATTTAAATTGGTATCAGCAGGAACAAGGGAAGGTCCCTAAACTCCTGA	627	0.10028999323402439	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1345	0.0	64.28148	1
ATCAACG	1400	0.0	61.20231	3
CAACGCA	1400	0.0	61.197414	5
TCAACGC	1405	0.0	60.97963	4
AACGCAG	1420	0.0	60.335484	6
TATCAAC	1575	0.0	54.85922	2
ACGCAGA	1600	0.0	53.54774	7
CGCAGAG	1635	0.0	52.401455	8
GCAGAGT	1900	0.0	45.471767	9
AGTACGG	95	1.0714843E-4	37.89314	5
GTCATAG	615	0.0	35.145767	1
GGTATCA	1115	0.0	32.955067	1
ATAGGTG	695	0.0	31.077824	4
TCATAGG	725	0.0	29.79423	2
GTACATG	1355	0.0	29.776636	1
GAATACG	250	2.6320777E-9	28.798784	9
CAGAGCG	615	0.0	28.096375	9
ACATGGG	1450	0.0	27.807947	3
TACATGG	1435	0.0	27.59686	2
CATGGGA	835	0.0	27.591648	4